{
  "id": 575210,
  "title": "Submission failed biopython",
  "url": "/competitions/stanford-rna-3d-folding/discussion/575210",
  "author_name": "",
  "post_date": "2025-04-26T19:38:54.965744900Z",
  "votes": null,
  "comment_count": 6,
  "views": 0,
  "content": "<p><strong>I am having this issue while running my notebook:</strong></p>\n<p>[ <br>\nWARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nERROR: Could not find a version that satisfies the requirement biopython (from versions: none)<br>\nERROR: No matching distribution found for biopython<br>\n]</p>\n<p>\u001b[0m\u001b[33mWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\u001b[0m\u001b[33m</p>",
  "messages": [
    {
      "id": "3187970",
      "postDate": "04/26/2025 19:38:54",
      "content": "<p><strong>I am having this issue while running my notebook:</strong></p>\n<p>[ <br>\nWARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nWARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/<br>\nERROR: Could not find a version that satisfies the requirement biopython (from versions: none)<br>\nERROR: No matching distribution found for biopython<br>\n]</p>\n<p>\u001b[0m\u001b[33mWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\u001b[0m\u001b[33m</p>",
      "rawMarkdown": "**I am having this issue while running my notebook:**\n\n[ \nWARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a0669dcd0>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a0643e3d0>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06452710>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06425d90>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06434150>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nERROR: Could not find a version that satisfies the requirement biopython (from versions: none)\nERROR: No matching distribution found for biopython\n]\n\n\u001b[0m\u001b[33mWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06425d90>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\u001b[0m\u001b[33m",
      "votes": null
    },
    {
      "id": "3188017",
      "postDate": "04/26/2025 23:01:06",
      "content": "<p>Internet access may be disabled in your notebook. In this competition, submitted notebooks must have internet access disabled.</p>",
      "rawMarkdown": "Internet access may be disabled in your notebook. In this competition, submitted notebooks must have internet access disabled.",
      "votes": null
    },
    {
      "id": "3188102",
      "postDate": "04/27/2025 03:57:35",
      "content": "<p>without internet disable, I am not able to submit my notebook. How can do that?</p>",
      "rawMarkdown": "without internet disable, I am not able to submit my notebook. How can do that?",
      "votes": null
    },
    {
      "id": "3188271",
      "postDate": "04/27/2025 10:12:47",
      "content": "<p>At the top of your notebook, click on \"Add-ons\". From the dropdown, select \"Install Dependencies\". In the input box that appears, paste the dependencies you need, for example:<br>\npip install biopython<br>\nSave the dependencies and then save the notebook. This will install the required packages offline, allowing you to successfully submit your notebook without needing internet access.</p>",
      "rawMarkdown": "At the top of your notebook, click on \"Add-ons\". From the dropdown, select \"Install Dependencies\". In the input box that appears, paste the dependencies you need, for example:\npip install biopython\nSave the dependencies and then save the notebook. This will install the required packages offline, allowing you to successfully submit your notebook without needing internet access.",
      "votes": null
    },
    {
      "id": "3189014",
      "postDate": "04/28/2025 15:59:45",
      "content": "<p>I have tried but that is also not working for me.</p>",
      "rawMarkdown": "I have tried but that is also not working for me.",
      "votes": null
    },
    {
      "id": "3189054",
      "postDate": "04/28/2025 17:10:03",
      "content": "<p>did you run the notebook or click save version? if u use add on you need to click save_version present at right corner then this dependencies will work with out internet</p>\n<p>Or  download wheel packages of your required dependencies and upload it you notebook and use pip install /kaggle/input/installs/.whl</p>",
      "rawMarkdown": "did you run the notebook or click save version? if u use add on you need to click save_version present at right corner then this dependencies will work with out internet\n\n\nOr  download wheel packages of your required dependencies and upload it you notebook and use pip install /kaggle/input/installs/.whl",
      "votes": null
    },
    {
      "id": "3189075",
      "postDate": "04/28/2025 17:34:15",
      "content": "<p>Let me try once again i will come back again and  thank you for the response.</p>",
      "rawMarkdown": "Let me try once again i will come back again and  thank you for the response.",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 3188017,
      "author_name": "hvanphucs112",
      "author_url": "",
      "post_date": "04/26/2025 23:01:06",
      "content": "<p>Internet access may be disabled in your notebook. In this competition, submitted notebooks must have internet access disabled.</p>",
      "votes": null,
      "replies": [
        {
          "id": 3188102,
          "author_name": "mahboobbiswas",
          "author_url": "",
          "post_date": "04/27/2025 03:57:35",
          "content": "<p>without internet disable, I am not able to submit my notebook. How can do that?</p>",
          "votes": null,
          "replies": [
            {
              "id": 3188271,
              "author_name": "arunodhayan",
              "author_url": "",
              "post_date": "04/27/2025 10:12:47",
              "content": "<p>At the top of your notebook, click on \"Add-ons\". From the dropdown, select \"Install Dependencies\". In the input box that appears, paste the dependencies you need, for example:<br>\npip install biopython<br>\nSave the dependencies and then save the notebook. This will install the required packages offline, allowing you to successfully submit your notebook without needing internet access.</p>",
              "votes": null,
              "replies": [
                {
                  "id": 3189014,
                  "author_name": "mahboobbiswas",
                  "author_url": "",
                  "post_date": "04/28/2025 15:59:45",
                  "content": "<p>I have tried but that is also not working for me.</p>",
                  "votes": null,
                  "replies": [
                    {
                      "id": 3189054,
                      "author_name": "arunodhayan",
                      "author_url": "",
                      "post_date": "04/28/2025 17:10:03",
                      "content": "<p>did you run the notebook or click save version? if u use add on you need to click save_version present at right corner then this dependencies will work with out internet</p>\n<p>Or  download wheel packages of your required dependencies and upload it you notebook and use pip install /kaggle/input/installs/.whl</p>",
                      "votes": null,
                      "replies": [
                        {
                          "id": 3189075,
                          "author_name": "mahboobbiswas",
                          "author_url": "",
                          "post_date": "04/28/2025 17:34:15",
                          "content": "<p>Let me try once again i will come back again and  thank you for the response.</p>",
                          "votes": null,
                          "replies": []
                        }
                      ]
                    }
                  ]
                }
              ]
            }
          ]
        }
      ]
    }
  ],
  "raw_markdown_by_id": {
    "3187970": "**I am having this issue while running my notebook:**\n\n[ \nWARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a0669dcd0>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=3, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a0643e3d0>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=2, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06452710>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06425d90>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nWARNING: Retrying (Retry(total=0, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06434150>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\nERROR: Could not find a version that satisfies the requirement biopython (from versions: none)\nERROR: No matching distribution found for biopython\n]\n\n\u001b[0m\u001b[33mWARNING: Retrying (Retry(total=1, connect=None, read=None, redirect=None, status=None)) after connection broken by 'NewConnectionError('<pip._vendor.urllib3.connection.HTTPSConnection object at 0x7d0a06425d90>: Failed to establish a new connection: [Errno -3] Temporary failure in name resolution')': /simple/biopython/\u001b[0m\u001b[33m",
    "3188017": "Internet access may be disabled in your notebook. In this competition, submitted notebooks must have internet access disabled.",
    "3188102": "without internet disable, I am not able to submit my notebook. How can do that?",
    "3188271": "At the top of your notebook, click on \"Add-ons\". From the dropdown, select \"Install Dependencies\". In the input box that appears, paste the dependencies you need, for example:\npip install biopython\nSave the dependencies and then save the notebook. This will install the required packages offline, allowing you to successfully submit your notebook without needing internet access.",
    "3189014": "I have tried but that is also not working for me.",
    "3189054": "did you run the notebook or click save version? if u use add on you need to click save_version present at right corner then this dependencies will work with out internet\n\n\nOr  download wheel packages of your required dependencies and upload it you notebook and use pip install /kaggle/input/installs/.whl",
    "3189075": "Let me try once again i will come back again and  thank you for the response."
  },
  "source": "meta"
}