{
  "id": 574333,
  "title": "About Protenix",
  "url": "/competitions/stanford-rna-3d-folding/discussion/574333",
  "author_name": "",
  "post_date": "2025-04-21T11:11:40.328543600Z",
  "votes": null,
  "comment_count": 3,
  "views": 0,
  "content": "<p>Protenix scored on LB was about 0.32. But, different to my implementation, there are some notebooks that score better than mine using same model, protenix. While I am analyzing their codes, I still can't find some differences. ANYBODY have some ideas about why mine(0.32) and some other notebooks(0.34) is different.</p>",
  "messages": [
    {
      "id": "3183844",
      "postDate": "04/21/2025 11:11:40",
      "content": "<p>Protenix scored on LB was about 0.32. But, different to my implementation, there are some notebooks that score better than mine using same model, protenix. While I am analyzing their codes, I still can't find some differences. ANYBODY have some ideas about why mine(0.32) and some other notebooks(0.34) is different.</p>",
      "rawMarkdown": "Protenix scored on LB was about 0.32. But, different to my implementation, there are some notebooks that score better than mine using same model, protenix. While I am analyzing their codes, I still can't find some differences. ANYBODY have some ideas about why mine(0.32) and some other notebooks(0.34) is different.",
      "votes": null
    },
    {
      "id": "3183856",
      "postDate": "04/21/2025 11:30:42",
      "content": "<p><a href=\"https://www.kaggle.com/doheon114\" target=\"_blank\">@doheon114</a> randomness and the method used to select top 5 conformations</p>",
      "rawMarkdown": "doheon114 randomness and the method used to select top 5 conformations",
      "votes": null
    },
    {
      "id": "3183877",
      "postDate": "04/21/2025 11:58:13",
      "content": "<p>Could you share how to select top5 conformations? It seems that calculating energy is slow.</p>",
      "rawMarkdown": "Could you share how to select top5 conformations? It seems that calculating energy is slow.",
      "votes": null
    },
    {
      "id": "3183890",
      "postDate": "04/21/2025 12:10:10",
      "content": "<p><a href=\"https://www.kaggle.com/code/adamlogman/randomness\" target=\"_blank\">https://www.kaggle.com/code/adamlogman/randomness</a><br>\nIf you mention this notebook, it seems that it achieves its score by selecting good random seed</p>",
      "rawMarkdown": "https://www.kaggle.com/code/adamlogman/randomness\nIf you mention this notebook, it seems that it achieves its score by selecting good random seed",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 3183856,
      "author_name": "arunodhayan",
      "author_url": "",
      "post_date": "04/21/2025 11:30:42",
      "content": "<p><a href=\"https://www.kaggle.com/doheon114\" target=\"_blank\">@doheon114</a> randomness and the method used to select top 5 conformations</p>",
      "votes": null,
      "replies": [
        {
          "id": 3183877,
          "author_name": "biancochiu",
          "author_url": "",
          "post_date": "04/21/2025 11:58:13",
          "content": "<p>Could you share how to select top5 conformations? It seems that calculating energy is slow.</p>",
          "votes": null,
          "replies": []
        },
        {
          "id": 3183890,
          "author_name": "doheon114",
          "author_url": "",
          "post_date": "04/21/2025 12:10:10",
          "content": "<p><a href=\"https://www.kaggle.com/code/adamlogman/randomness\" target=\"_blank\">https://www.kaggle.com/code/adamlogman/randomness</a><br>\nIf you mention this notebook, it seems that it achieves its score by selecting good random seed</p>",
          "votes": null,
          "replies": []
        }
      ]
    }
  ],
  "raw_markdown_by_id": {
    "3183844": "Protenix scored on LB was about 0.32. But, different to my implementation, there are some notebooks that score better than mine using same model, protenix. While I am analyzing their codes, I still can't find some differences. ANYBODY have some ideas about why mine(0.32) and some other notebooks(0.34) is different.",
    "3183856": "doheon114 randomness and the method used to select top 5 conformations",
    "3183877": "Could you share how to select top5 conformations? It seems that calculating energy is slow.",
    "3183890": "https://www.kaggle.com/code/adamlogman/randomness\nIf you mention this notebook, it seems that it achieves its score by selecting good random seed"
  },
  "source": "meta"
}