{
  "id": 568878,
  "title": "PDB file for custom residues sequence?",
  "url": "/competitions/stanford-rna-3d-folding/discussion/568878",
  "author_name": "",
  "post_date": "2025-03-18T13:59:59.531261800Z",
  "votes": null,
  "comment_count": 1,
  "views": 0,
  "content": "<p>I'm wondering how to generate PDB file for a custom residues sequence. What I want is input sequence like 'GGGGGCCACAG' and standard PDB file as output, with random atom coordinates. <br>\nThanks!</p>",
  "messages": [
    {
      "id": "3153196",
      "postDate": "03/18/2025 13:59:59",
      "content": "<p>I'm wondering how to generate PDB file for a custom residues sequence. What I want is input sequence like 'GGGGGCCACAG' and standard PDB file as output, with random atom coordinates. <br>\nThanks!</p>",
      "rawMarkdown": "I'm wondering how to generate PDB file for a custom residues sequence. What I want is input sequence like 'GGGGGCCACAG' and standard PDB file as output, with random atom coordinates. \nThanks!",
      "votes": null
    },
    {
      "id": "3153214",
      "postDate": "03/18/2025 14:18:17",
      "content": "<p>Hi. Rather than a specific format or package what you really need to build a pdb for a custom sequence is his 3D structure. Precisely the target of the models we are training.</p>",
      "rawMarkdown": "Hi. Rather than a specific format or package what you really need to build a pdb for a custom sequence is his 3D structure. Precisely the target of the models we are training.",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 3153214,
      "author_name": "sacuscreed",
      "author_url": "",
      "post_date": "03/18/2025 14:18:17",
      "content": "<p>Hi. Rather than a specific format or package what you really need to build a pdb for a custom sequence is his 3D structure. Precisely the target of the models we are training.</p>",
      "votes": null,
      "replies": []
    }
  ],
  "raw_markdown_by_id": {
    "3153196": "I'm wondering how to generate PDB file for a custom residues sequence. What I want is input sequence like 'GGGGGCCACAG' and standard PDB file as output, with random atom coordinates. \nThanks!",
    "3153214": "Hi. Rather than a specific format or package what you really need to build a pdb for a custom sequence is his 3D structure. Precisely the target of the models we are training."
  },
  "source": "meta"
}