{
  "id": 266557,
  "title": "Please assist how to solve notebook time out error",
  "url": "/competitions/rsna-miccai-brain-tumor-radiogenomic-classification/discussion/266557",
  "author_name": "",
  "post_date": "2021-08-19T14:19:34.745176900Z",
  "votes": 1,
  "comment_count": 5,
  "views": 0,
  "content": "<p>When I am saving the version and committing it takes 3 hours to generate a submission.csv file. But in the LB scoring, the code runs for more than 9 hours, and eventually, I got a time-out error.</p>\n<p>Is there any way to solve this issue? How I can estimate my code running time on a private test dataset?</p>",
  "messages": [
    {
      "id": "1481467",
      "postDate": "08/19/2021 14:19:34",
      "content": "<p>When I am saving the version and committing it takes 3 hours to generate a submission.csv file. But in the LB scoring, the code runs for more than 9 hours, and eventually, I got a time-out error.</p>\n<p>Is there any way to solve this issue? How I can estimate my code running time on a private test dataset?</p>",
      "rawMarkdown": "When I am saving the version and committing it takes 3 hours to generate a submission.csv file. But in the LB scoring, the code runs for more than 9 hours, and eventually, I got a time-out error.\n\nIs there any way to solve this issue? How I can estimate my code running time on a private test dataset?",
      "votes": null
    },
    {
      "id": "1481698",
      "postDate": "08/19/2021 16:24:21",
      "content": "<p>From the data description page:<br>\n<code>NOTE: the total size of the rerun test set (Public and Private) is ~5x the size of the Public test set</code></p>\n<p>I guess if your pipeline is 3h for the test folder then it should take 5 times more to run it on the whole data. If your code got a score without an error then you can be assured that there will be no problem on the private part</p>",
      "rawMarkdown": "From the data description page:\n`NOTE: the total size of the rerun test set (Public and Private) is ~5x the size of the Public test set`\n\nI guess if your pipeline is 3h for the test folder then it should take 5 times more to run it on the whole data. If your code got a score without an error then you can be assured that there will be no problem on the private part",
      "votes": null
    },
    {
      "id": "1481727",
      "postDate": "08/19/2021 16:38:36",
      "content": "<p>Thanks for your reply. Keeping that in mind I made modifications in the code to generate submission file within 1 hour 2 min and again submitted for public scoring, let's see whether I get time out error this time.<br>\nso if it takes 5 times more, then it should take around 5-6 hours for scoring a public score, <br>\nI am waiting to see what happens because while I was submitting  DL models to generate the submission file it took 5 hours and the same amount of time for public scoring, that's why I am confused.</p>",
      "rawMarkdown": "Thanks for your reply. Keeping that in mind I made modifications in the code to generate submission file within 1 hour 2 min and again submitted for public scoring, let's see whether I get time out error this time.\nso if it takes 5 times more, then it should take around 5-6 hours for scoring a public score, \nI am waiting to see what happens because while I was submitting  DL models to generate the submission file it took 5 hours and the same amount of time for public scoring, that's why I am confused.",
      "votes": null
    },
    {
      "id": "1481747",
      "postDate": "08/19/2021 16:45:32",
      "content": "<p>Also if you want just to see your public score, you can use fast submission like here</p>\n<p><a href=\"https://www.kaggle.com/narek1110/fast-submission-rsna\" target=\"_blank\">https://www.kaggle.com/narek1110/fast-submission-rsna</a></p>",
      "rawMarkdown": "Also if you want just to see your public score, you can use fast submission like here\n\nhttps://www.kaggle.com/narek1110/fast-submission-rsna",
      "votes": null
    },
    {
      "id": "1481783",
      "postDate": "08/19/2021 17:00:55",
      "content": "<p>I looked over it, that means I can test by only submitting my submission.csv file, right? <br>\nI mean to get an idea of whether my code is fine or not?</p>",
      "rawMarkdown": "I looked over it, that means I can test by only submitting my submission.csv file, right? \nI mean to get an idea of whether my code is fine or not?",
      "votes": null
    },
    {
      "id": "1481805",
      "postDate": "08/19/2021 17:14:37",
      "content": "<p>Yeah, in case if you want to validate the results of your experiment on the public leaderboard. That submission will not be valid as the final submission.</p>",
      "rawMarkdown": "Yeah, in case if you want to validate the results of your experiment on the public leaderboard. That submission will not be valid as the final submission.",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 1481698,
      "author_name": "narek1110",
      "author_url": "",
      "post_date": "08/19/2021 16:24:21",
      "content": "<p>From the data description page:<br>\n<code>NOTE: the total size of the rerun test set (Public and Private) is ~5x the size of the Public test set</code></p>\n<p>I guess if your pipeline is 3h for the test folder then it should take 5 times more to run it on the whole data. If your code got a score without an error then you can be assured that there will be no problem on the private part</p>",
      "votes": null,
      "replies": [
        {
          "id": 1481727,
          "author_name": "wfarzana",
          "author_url": "",
          "post_date": "08/19/2021 16:38:36",
          "content": "<p>Thanks for your reply. Keeping that in mind I made modifications in the code to generate submission file within 1 hour 2 min and again submitted for public scoring, let's see whether I get time out error this time.<br>\nso if it takes 5 times more, then it should take around 5-6 hours for scoring a public score, <br>\nI am waiting to see what happens because while I was submitting  DL models to generate the submission file it took 5 hours and the same amount of time for public scoring, that's why I am confused.</p>",
          "votes": null,
          "replies": []
        },
        {
          "id": 1481747,
          "author_name": "narek1110",
          "author_url": "",
          "post_date": "08/19/2021 16:45:32",
          "content": "<p>Also if you want just to see your public score, you can use fast submission like here</p>\n<p><a href=\"https://www.kaggle.com/narek1110/fast-submission-rsna\" target=\"_blank\">https://www.kaggle.com/narek1110/fast-submission-rsna</a></p>",
          "votes": null,
          "replies": []
        },
        {
          "id": 1481783,
          "author_name": "wfarzana",
          "author_url": "",
          "post_date": "08/19/2021 17:00:55",
          "content": "<p>I looked over it, that means I can test by only submitting my submission.csv file, right? <br>\nI mean to get an idea of whether my code is fine or not?</p>",
          "votes": null,
          "replies": []
        },
        {
          "id": 1481805,
          "author_name": "narek1110",
          "author_url": "",
          "post_date": "08/19/2021 17:14:37",
          "content": "<p>Yeah, in case if you want to validate the results of your experiment on the public leaderboard. That submission will not be valid as the final submission.</p>",
          "votes": null,
          "replies": []
        }
      ]
    }
  ],
  "raw_markdown_by_id": {
    "1481467": "When I am saving the version and committing it takes 3 hours to generate a submission.csv file. But in the LB scoring, the code runs for more than 9 hours, and eventually, I got a time-out error.\n\nIs there any way to solve this issue? How I can estimate my code running time on a private test dataset?",
    "1481698": "From the data description page:\n`NOTE: the total size of the rerun test set (Public and Private) is ~5x the size of the Public test set`\n\nI guess if your pipeline is 3h for the test folder then it should take 5 times more to run it on the whole data. If your code got a score without an error then you can be assured that there will be no problem on the private part",
    "1481727": "Thanks for your reply. Keeping that in mind I made modifications in the code to generate submission file within 1 hour 2 min and again submitted for public scoring, let's see whether I get time out error this time.\nso if it takes 5 times more, then it should take around 5-6 hours for scoring a public score, \nI am waiting to see what happens because while I was submitting  DL models to generate the submission file it took 5 hours and the same amount of time for public scoring, that's why I am confused.",
    "1481747": "Also if you want just to see your public score, you can use fast submission like here\n\nhttps://www.kaggle.com/narek1110/fast-submission-rsna",
    "1481783": "I looked over it, that means I can test by only submitting my submission.csv file, right? \nI mean to get an idea of whether my code is fine or not?",
    "1481805": "Yeah, in case if you want to validate the results of your experiment on the public leaderboard. That submission will not be valid as the final submission."
  },
  "source": "meta"
}