{
  "id": 361082,
  "title": "TruncatedSVD gives error: \"ValueError: array must not contain infs or NaNs\"",
  "url": "/competitions/open-problems-multimodal/discussion/361082",
  "author_name": "",
  "post_date": "2022-10-19T17:08:07.212303700Z",
  "votes": 1,
  "comment_count": 3,
  "views": 0,
  "content": "<p>So, as the title says, I have downloaded the sparse datasets for Multiome, and tried to perform TruncatedSVD as in the public notebooks.</p>\n<p>However, I get the error mentioned in the title…</p>\n<p>Anyone has had that too? Any idea why I am getting this error when the public notebooks seem to work fine for others?</p>\n<p>Thanks a lot!</p>",
  "messages": [
    {
      "id": "1995495",
      "postDate": "10/19/2022 17:08:07",
      "content": "<p>So, as the title says, I have downloaded the sparse datasets for Multiome, and tried to perform TruncatedSVD as in the public notebooks.</p>\n<p>However, I get the error mentioned in the title…</p>\n<p>Anyone has had that too? Any idea why I am getting this error when the public notebooks seem to work fine for others?</p>\n<p>Thanks a lot!</p>",
      "rawMarkdown": "So, as the title says, I have downloaded the sparse datasets for Multiome, and tried to perform TruncatedSVD as in the public notebooks.\n\nHowever, I get the error mentioned in the title...\n\nAnyone has had that too? Any idea why I am getting this error when the public notebooks seem to work fine for others?\n\nThanks a lot!",
      "votes": null
    },
    {
      "id": "1995888",
      "postDate": "10/19/2022 22:24:16",
      "content": "<p>I can't say, but to investigate I would start by forking the public notebook that works fine and running it line by line and seeing where it is different from your code. </p>",
      "rawMarkdown": "I can't say, but to investigate I would start by forking the public notebook that works fine and running it line by line and seeing where it is different from your code.",
      "votes": null
    },
    {
      "id": "1996342",
      "postDate": "10/20/2022 07:41:39",
      "content": "<p>Thanks Chris for your reply. I just found out that doing it on the Kaggle environment works… But on the Saturn environment yields the error.</p>\n<p>Could be dependency issues, or OS related..</p>",
      "rawMarkdown": "Thanks Chris for your reply. I just found out that doing it on the Kaggle environment works... But on the Saturn environment yields the error.\n\nCould be dependency issues, or OS related..",
      "votes": null
    },
    {
      "id": "1997421",
      "postDate": "10/20/2022 21:08:23",
      "content": "<p>That is weird. Thank you for the heads up on that issue.</p>",
      "rawMarkdown": "That is weird. Thank you for the heads up on that issue.",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 1995888,
      "author_name": "chrisrichardmiles",
      "author_url": "",
      "post_date": "10/19/2022 22:24:16",
      "content": "<p>I can't say, but to investigate I would start by forking the public notebook that works fine and running it line by line and seeing where it is different from your code. </p>",
      "votes": null,
      "replies": [
        {
          "id": 1996342,
          "author_name": "thomasuriot",
          "author_url": "",
          "post_date": "10/20/2022 07:41:39",
          "content": "<p>Thanks Chris for your reply. I just found out that doing it on the Kaggle environment works… But on the Saturn environment yields the error.</p>\n<p>Could be dependency issues, or OS related..</p>",
          "votes": null,
          "replies": []
        },
        {
          "id": 1997421,
          "author_name": "chrisrichardmiles",
          "author_url": "",
          "post_date": "10/20/2022 21:08:23",
          "content": "<p>That is weird. Thank you for the heads up on that issue.</p>",
          "votes": null,
          "replies": []
        }
      ]
    }
  ],
  "raw_markdown_by_id": {
    "1995495": "So, as the title says, I have downloaded the sparse datasets for Multiome, and tried to perform TruncatedSVD as in the public notebooks.\n\nHowever, I get the error mentioned in the title...\n\nAnyone has had that too? Any idea why I am getting this error when the public notebooks seem to work fine for others?\n\nThanks a lot!",
    "1995888": "I can't say, but to investigate I would start by forking the public notebook that works fine and running it line by line and seeing where it is different from your code.",
    "1996342": "Thanks Chris for your reply. I just found out that doing it on the Kaggle environment works... But on the Saturn environment yields the error.\n\nCould be dependency issues, or OS related..",
    "1997421": "That is weird. Thank you for the heads up on that issue."
  },
  "source": "meta"
}