{
  "id": 340261,
  "title": "Question About the Image Size",
  "url": "/competitions/hubmap-organ-segmentation/discussion/340261",
  "author_name": "",
  "post_date": "2022-07-28T05:44:39.440954700Z",
  "votes": 3,
  "comment_count": 6,
  "views": 0,
  "content": "<p>In this competitions, most of the image size are 3000 <em>3000, but same not. for training, the general method is to unify the image to  256</em>256 or 512*512. But compared with original image, there are some information loss.  Any better method such as Super resolution reconstruction can be applied or just unify the image to the same size?(As a green hand)</p>",
  "messages": [
    {
      "id": "1874179",
      "postDate": "07/28/2022 05:44:39",
      "content": "<p>In this competitions, most of the image size are 3000 <em>3000, but same not. for training, the general method is to unify the image to  256</em>256 or 512*512. But compared with original image, there are some information loss.  Any better method such as Super resolution reconstruction can be applied or just unify the image to the same size?(As a green hand)</p>",
      "rawMarkdown": "In this competitions, most of the image size are 3000 *3000, but same not. for training, the general method is to unify the image to  256*256 or 512*512. But compared with original image, there are some information loss.  Any better method such as Super resolution reconstruction can be applied or just unify the image to the same size?(As a green hand)",
      "votes": null
    },
    {
      "id": "1874192",
      "postDate": "07/28/2022 06:02:26",
      "content": "<p>In the testing dataset, there are also images that are 160x160 px: Quoting: \" The HuBMAP images range in size from 4500x4500 down to 160x160 pixels.\" What I usually do in such a case is huge pictures sliced on tiles that there is as close as it gets that every tile is 512x512 and then scale down by 1/2 to match 256x256. If there are some picture that is 160x160 I joust scale them up to match 256x256. If you do it like that you will not get \"TO MUCH\" of an information loss since the scale ratio is around [-0.5, +0.5] and you boost your training since you scale down huge pictures.</p>\n<p>IMHO: Don't worry about Super-resolution reconstruction, since there is not much time left for submissions, I don't think you will benefit from that anyway.</p>",
      "rawMarkdown": "In the testing dataset, there are also images that are 160x160 px: Quoting: \" The HuBMAP images range in size from 4500x4500 down to 160x160 pixels.\" What I usually do in such a case is huge pictures sliced on tiles that there is as close as it gets that every tile is 512x512 and then scale down by 1/2 to match 256x256. If there are some picture that is 160x160 I joust scale them up to match 256x256. If you do it like that you will not get \"TO MUCH\" of an information loss since the scale ratio is around [-0.5, +0.5] and you boost your training since you scale down huge pictures.\n\nIMHO: Don't worry about Super-resolution reconstruction, since there is not much time left for submissions, I don't think you will benefit from that anyway.",
      "votes": null
    },
    {
      "id": "1874947",
      "postDate": "07/28/2022 16:05:17",
      "content": "<p>introduce the Transformer sequence feature extraction network and use encoding and decoding to realize that each pixel has the global receptive field.</p>",
      "rawMarkdown": "introduce the Transformer sequence feature extraction network and use encoding and decoding to realize that each pixel has the global receptive field.",
      "votes": null
    },
    {
      "id": "1876733",
      "postDate": "07/30/2022 03:52:27",
      "content": "<p>Thanks a lot, it is really helpful, I will try it.</p>",
      "rawMarkdown": "Thanks a lot, it is really helpful, I will try it.",
      "votes": null
    },
    {
      "id": "1876734",
      "postDate": "07/30/2022 03:53:04",
      "content": "<p>Thanks a lot, I will  try the transformer model soon.</p>",
      "rawMarkdown": "Thanks a lot, I will  try the transformer model soon.",
      "votes": null
    },
    {
      "id": "1876784",
      "postDate": "07/30/2022 04:44:38",
      "content": "<p>If you find comments helpful you can upvote them.</p>",
      "rawMarkdown": "If you find comments helpful you can upvote them.",
      "votes": null
    },
    {
      "id": "1879296",
      "postDate": "08/01/2022 01:25:45",
      "content": "<p>All hpa images are at 0.4 m pixels<br>\nduring testing you can scale the test images to -&gt; test_image_height * test_pixel_size * ( model_input_shape / (3000 * 0.4) )</p>",
      "rawMarkdown": "All hpa images are at 0.4 m pixels\nduring testing you can scale the test images to -> test_image_height * test_pixel_size * ( model_input_shape / (3000 * 0.4) )",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 1874192,
      "author_name": "urosjarc",
      "author_url": "",
      "post_date": "07/28/2022 06:02:26",
      "content": "<p>In the testing dataset, there are also images that are 160x160 px: Quoting: \" The HuBMAP images range in size from 4500x4500 down to 160x160 pixels.\" What I usually do in such a case is huge pictures sliced on tiles that there is as close as it gets that every tile is 512x512 and then scale down by 1/2 to match 256x256. If there are some picture that is 160x160 I joust scale them up to match 256x256. If you do it like that you will not get \"TO MUCH\" of an information loss since the scale ratio is around [-0.5, +0.5] and you boost your training since you scale down huge pictures.</p>\n<p>IMHO: Don't worry about Super-resolution reconstruction, since there is not much time left for submissions, I don't think you will benefit from that anyway.</p>",
      "votes": null,
      "replies": [
        {
          "id": 1876733,
          "author_name": "pengbing",
          "author_url": "",
          "post_date": "07/30/2022 03:52:27",
          "content": "<p>Thanks a lot, it is really helpful, I will try it.</p>",
          "votes": null,
          "replies": []
        },
        {
          "id": 1876784,
          "author_name": "urosjarc",
          "author_url": "",
          "post_date": "07/30/2022 04:44:38",
          "content": "<p>If you find comments helpful you can upvote them.</p>",
          "votes": null,
          "replies": []
        }
      ]
    },
    {
      "id": 1874947,
      "author_name": "corex0",
      "author_url": "",
      "post_date": "07/28/2022 16:05:17",
      "content": "<p>introduce the Transformer sequence feature extraction network and use encoding and decoding to realize that each pixel has the global receptive field.</p>",
      "votes": null,
      "replies": [
        {
          "id": 1876734,
          "author_name": "pengbing",
          "author_url": "",
          "post_date": "07/30/2022 03:53:04",
          "content": "<p>Thanks a lot, I will  try the transformer model soon.</p>",
          "votes": null,
          "replies": []
        }
      ]
    },
    {
      "id": 1879296,
      "author_name": "rarun2596",
      "author_url": "",
      "post_date": "08/01/2022 01:25:45",
      "content": "<p>All hpa images are at 0.4 m pixels<br>\nduring testing you can scale the test images to -&gt; test_image_height * test_pixel_size * ( model_input_shape / (3000 * 0.4) )</p>",
      "votes": null,
      "replies": []
    }
  ],
  "raw_markdown_by_id": {
    "1874179": "In this competitions, most of the image size are 3000 *3000, but same not. for training, the general method is to unify the image to  256*256 or 512*512. But compared with original image, there are some information loss.  Any better method such as Super resolution reconstruction can be applied or just unify the image to the same size?(As a green hand)",
    "1874192": "In the testing dataset, there are also images that are 160x160 px: Quoting: \" The HuBMAP images range in size from 4500x4500 down to 160x160 pixels.\" What I usually do in such a case is huge pictures sliced on tiles that there is as close as it gets that every tile is 512x512 and then scale down by 1/2 to match 256x256. If there are some picture that is 160x160 I joust scale them up to match 256x256. If you do it like that you will not get \"TO MUCH\" of an information loss since the scale ratio is around [-0.5, +0.5] and you boost your training since you scale down huge pictures.\n\nIMHO: Don't worry about Super-resolution reconstruction, since there is not much time left for submissions, I don't think you will benefit from that anyway.",
    "1874947": "introduce the Transformer sequence feature extraction network and use encoding and decoding to realize that each pixel has the global receptive field.",
    "1876733": "Thanks a lot, it is really helpful, I will try it.",
    "1876734": "Thanks a lot, I will  try the transformer model soon.",
    "1876784": "If you find comments helpful you can upvote them.",
    "1879296": "All hpa images are at 0.4 m pixels\nduring testing you can scale the test images to -> test_image_height * test_pixel_size * ( model_input_shape / (3000 * 0.4) )"
  },
  "source": "meta"
}