{
  "id": 415558,
  "title": "How to debug submission scoring error ?",
  "url": "/competitions/hubmap-hacking-the-human-vasculature/discussion/415558",
  "author_name": "",
  "post_date": "2023-06-07T02:10:03.828075600Z",
  "votes": 1,
  "comment_count": 6,
  "views": 0,
  "content": "<p>Does anyone have useful tips to debug the submission scoring error ? In my case, i use the same code that successfully submit before, same model only train on different fold and get the error.</p>\n<p>Any help will be highly appreciated.</p>",
  "messages": [
    {
      "id": "2290639",
      "postDate": "06/07/2023 02:10:03",
      "content": "<p>Does anyone have useful tips to debug the submission scoring error ? In my case, i use the same code that successfully submit before, same model only train on different fold and get the error.</p>\n<p>Any help will be highly appreciated.</p>",
      "rawMarkdown": "Does anyone have useful tips to debug the submission scoring error ? In my case, i use the same code that successfully submit before, same model only train on different fold and get the error.\n\nAny help will be highly appreciated.",
      "votes": null
    },
    {
      "id": "2292064",
      "postDate": "06/08/2023 03:50:55",
      "content": "<p>you may want to check encoded masks, did you rescale your masks to origin image size before encode it?</p>",
      "rawMarkdown": "you may want to check encoded masks, did you rescale your masks to origin image size before encode it?",
      "votes": null
    },
    {
      "id": "2292274",
      "postDate": "06/08/2023 07:17:26",
      "content": "<p>I infer with size 512 x 512. Also i already have a function to check the mask size output before encoded and everything seem normal </p>",
      "rawMarkdown": "I infer with size 512 x 512. Also i already have a function to check the mask size output before encoded and everything seem normal",
      "votes": null
    },
    {
      "id": "2295806",
      "postDate": "06/11/2023 08:55:42",
      "content": "<p>I also only get submission scoring error no matter what I try. Submitting the original sample submission itself, or even just creating a normal submission.csv for the given data but pasting the sample submission's prediction string into every row, all throw a scoring error no matter what.</p>",
      "rawMarkdown": "I also only get submission scoring error no matter what I try. Submitting the original sample submission itself, or even just creating a normal submission.csv for the given data but pasting the sample submission's prediction string into every row, all throw a scoring error no matter what.",
      "votes": null
    },
    {
      "id": "2296319",
      "postDate": "06/11/2023 18:00:52",
      "content": "<p>I'm in the same situation. I have not been able to reach a succesful submission with our baseline and we only get this error. One question: is it mandatory to encode 512x512 binary masks? Does it affect to have a different size?</p>\n<p>I have also tried to submit the sample_submission.csv and I didn't make it work. I opened it with Pandas (pd.read_csv(…)) and then I made a submission.to_csv(\"submission.csv\") and I'm still getting the error. Is this wrong?</p>\n<p>Thank you so much in advance, we are newcomers in my team and every bit of help is super useful 😁</p>",
      "rawMarkdown": "I'm in the same situation. I have not been able to reach a succesful submission with our baseline and we only get this error. One question: is it mandatory to encode 512x512 binary masks? Does it affect to have a different size?\n\nI have also tried to submit the sample_submission.csv and I didn't make it work. I opened it with Pandas (pd.read_csv(...)) and then I made a submission.to_csv(\"submission.csv\") and I'm still getting the error. Is this wrong?\n\nThank you so much in advance, we are newcomers in my team and every bit of help is super useful 😁",
      "votes": null
    },
    {
      "id": "2316403",
      "postDate": "06/24/2023 21:39:46",
      "content": "<p>Hi! Have you been able to figure out the problem?</p>\n<p>Any help will be greatly appreciated</p>",
      "rawMarkdown": "Hi! Have you been able to figure out the problem?\n\nAny help will be greatly appreciated",
      "votes": null
    },
    {
      "id": "2316699",
      "postDate": "06/25/2023 07:09:36",
      "content": "<p>I personally ended up taking one of the sample dummy submission notebooks and slowly integrating it with my model step by step while making test submissions.</p>",
      "rawMarkdown": "I personally ended up taking one of the sample dummy submission notebooks and slowly integrating it with my model step by step while making test submissions.",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 2292064,
      "author_name": "ptran1203",
      "author_url": "",
      "post_date": "06/08/2023 03:50:55",
      "content": "<p>you may want to check encoded masks, did you rescale your masks to origin image size before encode it?</p>",
      "votes": null,
      "replies": [
        {
          "id": 2292274,
          "author_name": "researchbntz",
          "author_url": "",
          "post_date": "06/08/2023 07:17:26",
          "content": "<p>I infer with size 512 x 512. Also i already have a function to check the mask size output before encoded and everything seem normal </p>",
          "votes": null,
          "replies": []
        }
      ]
    },
    {
      "id": 2295806,
      "author_name": "ms0kol",
      "author_url": "",
      "post_date": "06/11/2023 08:55:42",
      "content": "<p>I also only get submission scoring error no matter what I try. Submitting the original sample submission itself, or even just creating a normal submission.csv for the given data but pasting the sample submission's prediction string into every row, all throw a scoring error no matter what.</p>",
      "votes": null,
      "replies": []
    },
    {
      "id": 2296319,
      "author_name": "santimontieleu",
      "author_url": "",
      "post_date": "06/11/2023 18:00:52",
      "content": "<p>I'm in the same situation. I have not been able to reach a succesful submission with our baseline and we only get this error. One question: is it mandatory to encode 512x512 binary masks? Does it affect to have a different size?</p>\n<p>I have also tried to submit the sample_submission.csv and I didn't make it work. I opened it with Pandas (pd.read_csv(…)) and then I made a submission.to_csv(\"submission.csv\") and I'm still getting the error. Is this wrong?</p>\n<p>Thank you so much in advance, we are newcomers in my team and every bit of help is super useful 😁</p>",
      "votes": null,
      "replies": []
    },
    {
      "id": 2316403,
      "author_name": "aschamp",
      "author_url": "",
      "post_date": "06/24/2023 21:39:46",
      "content": "<p>Hi! Have you been able to figure out the problem?</p>\n<p>Any help will be greatly appreciated</p>",
      "votes": null,
      "replies": [
        {
          "id": 2316699,
          "author_name": "ms0kol",
          "author_url": "",
          "post_date": "06/25/2023 07:09:36",
          "content": "<p>I personally ended up taking one of the sample dummy submission notebooks and slowly integrating it with my model step by step while making test submissions.</p>",
          "votes": null,
          "replies": []
        }
      ]
    }
  ],
  "raw_markdown_by_id": {
    "2290639": "Does anyone have useful tips to debug the submission scoring error ? In my case, i use the same code that successfully submit before, same model only train on different fold and get the error.\n\nAny help will be highly appreciated.",
    "2292064": "you may want to check encoded masks, did you rescale your masks to origin image size before encode it?",
    "2292274": "I infer with size 512 x 512. Also i already have a function to check the mask size output before encoded and everything seem normal",
    "2295806": "I also only get submission scoring error no matter what I try. Submitting the original sample submission itself, or even just creating a normal submission.csv for the given data but pasting the sample submission's prediction string into every row, all throw a scoring error no matter what.",
    "2296319": "I'm in the same situation. I have not been able to reach a succesful submission with our baseline and we only get this error. One question: is it mandatory to encode 512x512 binary masks? Does it affect to have a different size?\n\nI have also tried to submit the sample_submission.csv and I didn't make it work. I opened it with Pandas (pd.read_csv(...)) and then I made a submission.to_csv(\"submission.csv\") and I'm still getting the error. Is this wrong?\n\nThank you so much in advance, we are newcomers in my team and every bit of help is super useful 😁",
    "2316403": "Hi! Have you been able to figure out the problem?\n\nAny help will be greatly appreciated",
    "2316699": "I personally ended up taking one of the sample dummy submission notebooks and slowly integrating it with my model step by step while making test submissions."
  },
  "source": "meta"
}