{
  "id": 412799,
  "title": "Hand Labeled WSIs ✍️ & More Data  🖼️",
  "url": "/competitions/hubmap-hacking-the-human-vasculature/discussion/412799",
  "author_name": "",
  "post_date": "2023-05-25T09:26:32.554998900Z",
  "votes": 2,
  "comment_count": 3,
  "views": 0,
  "content": "<p>Here are some datasets that you could use alongside some hand labeling of public WSIs ✍️:</p>\n<ul>\n<li><strong>Tools to access some publicly available histopathology WSIs:</strong></li>\n</ul>\n<ol>\n<li><a href=\"https://www.cancerimagingarchive.net/histopathology-imaging-on-tcia/\" target=\"_blank\">Cancer Imaging Archive</a> </li>\n<li><a href=\"https://pathiip.org/\" target=\"_blank\">PathIIP</a> </li>\n<li><a href=\"https://paperswithcode.com/datasets\" target=\"_blank\">Datasets from PapersWithCode</a> </li>\n</ol>\n<ul>\n<li><strong>You can also use data from previous competitions:</strong></li>\n</ul>\n<ol>\n<li><a href=\"https://www.kaggle.com/competitions/hubmap-kidney-segmentation/\" target=\"_blank\">HuBMAP - Hacking the Kidney</a> </li>\n<li><a href=\"https://www.kaggle.com/competitions/hubmap-organ-segmentation/\" target=\"_blank\">HuBMAP + HPA - Hacking the Human Body</a> </li>\n</ol>\n<ul>\n<li><strong>Tools to label pathology WSIs:</strong></li>\n</ul>\n<ol>\n<li><a href=\"https://qupath.github.io/\" target=\"_blank\">QuPath</a> </li>\n<li><a href=\"https://roboflow.com/\" target=\"_blank\">RoboFlow</a> </li>\n<li><a href=\"https://segments.ai/\" target=\"_blank\">Segments.ai</a> </li>\n</ol>",
  "messages": [
    {
      "id": "2273611",
      "postDate": "05/25/2023 09:26:32",
      "content": "<p>Here are some datasets that you could use alongside some hand labeling of public WSIs ✍️:</p>\n<ul>\n<li><strong>Tools to access some publicly available histopathology WSIs:</strong></li>\n</ul>\n<ol>\n<li><a href=\"https://www.cancerimagingarchive.net/histopathology-imaging-on-tcia/\" target=\"_blank\">Cancer Imaging Archive</a> </li>\n<li><a href=\"https://pathiip.org/\" target=\"_blank\">PathIIP</a> </li>\n<li><a href=\"https://paperswithcode.com/datasets\" target=\"_blank\">Datasets from PapersWithCode</a> </li>\n</ol>\n<ul>\n<li><strong>You can also use data from previous competitions:</strong></li>\n</ul>\n<ol>\n<li><a href=\"https://www.kaggle.com/competitions/hubmap-kidney-segmentation/\" target=\"_blank\">HuBMAP - Hacking the Kidney</a> </li>\n<li><a href=\"https://www.kaggle.com/competitions/hubmap-organ-segmentation/\" target=\"_blank\">HuBMAP + HPA - Hacking the Human Body</a> </li>\n</ol>\n<ul>\n<li><strong>Tools to label pathology WSIs:</strong></li>\n</ul>\n<ol>\n<li><a href=\"https://qupath.github.io/\" target=\"_blank\">QuPath</a> </li>\n<li><a href=\"https://roboflow.com/\" target=\"_blank\">RoboFlow</a> </li>\n<li><a href=\"https://segments.ai/\" target=\"_blank\">Segments.ai</a> </li>\n</ol>",
      "rawMarkdown": "Here are some datasets that you could use alongside some hand labeling of public WSIs ✍️:\n\n* **Tools to access some publicly available histopathology WSIs:**\n\n1.  [Cancer Imaging Archive](https://www.cancerimagingarchive.net/histopathology-imaging-on-tcia/) \n2.  [PathIIP](https://pathiip.org/) \n3.  [Datasets from PapersWithCode](https://paperswithcode.com/datasets) \n\n\n* **You can also use data from previous competitions:**\n\n1.  [HuBMAP - Hacking the Kidney](https://www.kaggle.com/competitions/hubmap-kidney-segmentation/) \n2. [HuBMAP + HPA - Hacking the Human Body](https://www.kaggle.com/competitions/hubmap-organ-segmentation/) \n\n\n\n* **Tools to label pathology WSIs:**\n\n1. [QuPath](https://qupath.github.io/) \n2. [RoboFlow](https://roboflow.com/) \n3. [Segments.ai](https://segments.ai/)",
      "votes": null
    },
    {
      "id": "2283714",
      "postDate": "06/01/2023 12:59:37",
      "content": "<p>Be aware, that hand annotations are illegal in this competition.</p>",
      "rawMarkdown": "Be aware, that hand annotations are illegal in this competition.",
      "votes": null
    },
    {
      "id": "2310264",
      "postDate": "06/20/2023 08:50:16",
      "content": "<p>What is source of this statement please?</p>",
      "rawMarkdown": "What is source of this statement please?",
      "votes": null
    },
    {
      "id": "2310374",
      "postDate": "06/20/2023 10:12:25",
      "content": "<p><a href=\"https://www.kaggle.com/competitions/hubmap-hacking-the-human-vasculature/discussion/413000\" target=\"_blank\">https://www.kaggle.com/competitions/hubmap-hacking-the-human-vasculature/discussion/413000</a></p>",
      "rawMarkdown": "https://www.kaggle.com/competitions/hubmap-hacking-the-human-vasculature/discussion/413000",
      "votes": null
    }
  ],
  "comments": [
    {
      "id": 2283714,
      "author_name": "janglinko2",
      "author_url": "",
      "post_date": "06/01/2023 12:59:37",
      "content": "<p>Be aware, that hand annotations are illegal in this competition.</p>",
      "votes": null,
      "replies": [
        {
          "id": 2310264,
          "author_name": "kakadustew",
          "author_url": "",
          "post_date": "06/20/2023 08:50:16",
          "content": "<p>What is source of this statement please?</p>",
          "votes": null,
          "replies": [
            {
              "id": 2310374,
              "author_name": "janglinko2",
              "author_url": "",
              "post_date": "06/20/2023 10:12:25",
              "content": "<p><a href=\"https://www.kaggle.com/competitions/hubmap-hacking-the-human-vasculature/discussion/413000\" target=\"_blank\">https://www.kaggle.com/competitions/hubmap-hacking-the-human-vasculature/discussion/413000</a></p>",
              "votes": null,
              "replies": []
            }
          ]
        }
      ]
    }
  ],
  "raw_markdown_by_id": {
    "2273611": "Here are some datasets that you could use alongside some hand labeling of public WSIs ✍️:\n\n* **Tools to access some publicly available histopathology WSIs:**\n\n1.  [Cancer Imaging Archive](https://www.cancerimagingarchive.net/histopathology-imaging-on-tcia/) \n2.  [PathIIP](https://pathiip.org/) \n3.  [Datasets from PapersWithCode](https://paperswithcode.com/datasets) \n\n\n* **You can also use data from previous competitions:**\n\n1.  [HuBMAP - Hacking the Kidney](https://www.kaggle.com/competitions/hubmap-kidney-segmentation/) \n2. [HuBMAP + HPA - Hacking the Human Body](https://www.kaggle.com/competitions/hubmap-organ-segmentation/) \n\n\n\n* **Tools to label pathology WSIs:**\n\n1. [QuPath](https://qupath.github.io/) \n2. [RoboFlow](https://roboflow.com/) \n3. [Segments.ai](https://segments.ai/)",
    "2283714": "Be aware, that hand annotations are illegal in this competition.",
    "2310264": "What is source of this statement please?",
    "2310374": "https://www.kaggle.com/competitions/hubmap-hacking-the-human-vasculature/discussion/413000"
  },
  "source": "meta"
}