\n ![](\"https://images.proteinatlas.org/37366/453_F3_1_selected_medium.jpg\")
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\n ![](\"https://images.proteinatlas.org/58036/if_selected_medium.jpg\")
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\n ![](\"https://images.proteinatlas.org/56283/if_selected_medium.jpg\")
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\n ![](\"https://images.proteinatlas.org/39323/if_selected_medium.jpg\")
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\n"},{"metadata":{"_kg_hide-input":true,"trusted":true},"cell_type":"code","source":"cat = '13'\nprint(f'Train set examples for category {cat}')\ndfs = df[df.image_labels == cat].sample(n=10, random_state=42)\nimages = []\nids = []\nfor i,r in dfs.iterrows():\n fname = r['image_id'] + '_' + str(r['cell_id']) +'.jpg'\n images.append(path/'cells'/fname)\n ids.append(r['image_id'])\nimages = [PILImage.create(f) for f in images]\nipyplot.plot_images(images, labels=ids, max_images=9, img_width=300)","execution_count":null,"outputs":[]},{"metadata":{},"cell_type":"markdown","source":"# 14. Mitochondria\nMitochondria are small rod-like units in the cytosol, which are often distributed in a thread-like pattern along microtubules.\n\n\n ![](\"https://images.proteinatlas.org/36985/if_selected_medium.jpg\")
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"},{"metadata":{"_kg_hide-input":true,"trusted":true},"cell_type":"code","source":"cat = '14'\nprint(f'Train set examples for category {cat}')\ndfs = df[df.image_labels == cat].sample(n=10, random_state=42)\nimages = []\nids = []\nfor i,r in dfs.iterrows():\n fname = r['image_id'] + '_' + str(r['cell_id']) +'.jpg'\n images.append(path/'cells'/fname)\n ids.append(r['image_id'])\nimages = [PILImage.create(f) for f in images]\nipyplot.plot_images(images, labels=ids, max_images=9, img_width=300)","execution_count":null,"outputs":[]},{"metadata":{},"cell_type":"markdown","source":"# 15. Aggresome\n\nAn aggresome can be seen as a dense cytoplasmic inclusion, which is usually found close to the nucleus, in a region where the microtubule network is disrupted.\n\n\n ![](\"https://images.proteinatlas.org/65730/if_selected_medium.jpg\")
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\n"},{"metadata":{"_kg_hide-input":true,"trusted":true},"cell_type":"code","source":"cat = '15'\nprint(f'Train set examples for category {cat}')\ndfs = df[df.image_labels == cat].sample(n=10, random_state=42)\nimages = []\nids = []\nfor i,r in dfs.iterrows():\n fname = r['image_id'] + '_' + str(r['cell_id']) +'.jpg'\n images.append(path/'cells'/fname)\n ids.append(r['image_id'])\nimages = [PILImage.create(f) for f in images]\nipyplot.plot_images(images, labels=ids, max_images=9, img_width=300)","execution_count":null,"outputs":[]},{"metadata":{},"cell_type":"markdown","source":"# 16. Cytosol\n\nThe cytosol extends from the plasma membrane to the nuclear membrane. It can appear smooth or granular, and the staining is often stronger close to the nucleus.\n\n\n ![](\"https://images.proteinatlas.org/54177/if_selected_medium.jpg\")
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\n"},{"metadata":{"_kg_hide-input":true,"trusted":true},"cell_type":"code","source":"cat = '16'\nprint(f'Train set examples for category {cat}')\ndfs = df[df.image_labels == cat].sample(n=10, random_state=42)\nimages = []\nids = []\nfor i,r in dfs.iterrows():\n fname = r['image_id'] + '_' + str(r['cell_id']) +'.jpg'\n images.append(path/'cells'/fname)\n ids.append(r['image_id'])\nimages = [PILImage.create(f) for f in images]\nipyplot.plot_images(images, labels=ids, max_images=9, img_width=300)","execution_count":null,"outputs":[]},{"metadata":{},"cell_type":"markdown","source":"# 17. Vesicles and punctate cytosolic patterns\n\nThis class includes small circular compartments in the cytosol: Vesicles, Peroxisomes (lipid metabolism), Endosomes (sorting compartments), Lysosomes (degradation of molecules or eating up dead molecules), Lipid droplets (fat storage), Cytoplasmic bodies (distinct granules in the cytosol). They are highly dynamic, varying in numbers and size in response to environmental and cellular cues. They can be round or more elongated.\n\n ![](\"https://images.proteinatlas.org/6964/22_B1_1_selected_medium.jpg\")
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\n Vesicles |\n Peroxisomes |\n Endosomes |\n Lysosomes |\n Lipid droplets |\n Cytoplasmic bodies \n
![](\"https://images.proteinatlas.org/63647/if_selected_medium.jpg\")
\n ![](\"https://images.proteinatlas.org/52059/if_selected_medium.jpg\")
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\n ![](\"https://images.proteinatlas.org/5269/950_C1_1_selected_medium.jpg\")
\n ![](\"https://images.proteinatlas.org/35736/if_selected_medium.jpg\")
\n ![](\"https://images.proteinatlas.org/35735/1888_E10_3_selected_medium.jpg\")
\n ![](\"https://images.proteinatlas.org/9849/if_selected_medium.jpg\")
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\n ![](\"https://images.proteinatlas.org/40778/1767_F9_33_selected.jpg\")
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